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Introduction

Use our classifier to assign 16S rRNA gene sequences to the new phylogenetically consistent higher-order bacterial taxonomy proposed by Garrity et. al. Hierarchical taxa is based on a naïve Bayesian rRNA classifier. The newly trained classifier allows classification of both bacterial and archaeal 16S rRNA sequences. Classification algorithm has been published. Please cite: Wang, Q, G. M. Garrity, J. M. Tiedje, and J. R. Cole. 2007. Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy. Appl Environ Microbiol. 73(16):5261-7.

Help topics: Taxonomic Hierarchy Model and Classification Algorithm


Please enter your sequences:


Did you know you can select sequences from myRDP and Hierarchy Browser to do classification?


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Cut and paste sequence(s) (in Fasta, GenBank, or EMBL format):

   

 

Questions/comments: rdpstaff@msu.edu

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